Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Gm13036-201ENSMUST00000117799 748 ntBASIC15.63■□□□□ 0.09
Gm3139J3QK78 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Gm1401-201ENSMUST00000122048 772 ntBASIC15.63■□□□□ 0.09
Gm3139J3QK78 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Gm43514-201ENSMUST00000198852 424 ntBASIC15.63■□□□□ 0.09
Gm3139J3QK78 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.63■□□□□ 0.09
Gm3139J3QK78 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm3139J3QK78 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm3139J3QK78 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Gm3139J3QK78 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.62■□□□□ 0.09
Gm3139J3QK78 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Gm18206-201ENSMUST00000207027 926 ntBASIC15.61■□□□□ 0.09
Gm3139J3QK78 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.61■□□□□ 0.09
Gm3139J3QK78 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.61■□□□□ 0.09
Gm3139J3QK78 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Gm3139J3QK78 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Gm5682-201ENSMUST00000173402 505 ntBASIC15.6■□□□□ 0.09
Gm3139J3QK78 Gm37153-201ENSMUST00000193637 231 ntBASIC15.6■□□□□ 0.09
Gm3139J3QK78 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.6■□□□□ 0.09
Gm3139J3QK78 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.6■□□□□ 0.09
Gm3139J3QK78 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Gm3139J3QK78 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms