Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.82□□□□□ -0.04
Colca2F8VPY8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Gm11543-201ENSMUST00000120758 370 ntBASIC14.82□□□□□ -0.04
Colca2F8VPY8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Colca2F8VPY8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.81□□□□□ -0.04
Colca2F8VPY8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.81□□□□□ -0.04
Colca2F8VPY8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.81□□□□□ -0.04
Colca2F8VPY8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Gm38294-201ENSMUST00000192831 381 ntBASIC14.81□□□□□ -0.04
Colca2F8VPY8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.81□□□□□ -0.04
Colca2F8VPY8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Colca2F8VPY8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Colca2F8VPY8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Gm43767-201ENSMUST00000198933 381 ntBASIC14.8□□□□□ -0.04
Colca2F8VPY8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.8□□□□□ -0.04
Colca2F8VPY8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
Colca2F8VPY8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Colca2F8VPY8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Colca2F8VPY8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.79□□□□□ -0.04
Colca2F8VPY8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Gm38225-201ENSMUST00000194001 393 ntBASIC14.79□□□□□ -0.04
Colca2F8VPY8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Colca2F8VPY8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Colca2F8VPY8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms