Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntnap3E9PY62 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cntnap3E9PY62 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Gm6415-201ENSMUST00000118488 348 ntBASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Gm8344-201ENSMUST00000119813 856 ntBASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cntnap3E9PY62 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Mir6404-201ENSMUST00000183699 94 ntBASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Gm6888-201ENSMUST00000221983 706 ntBASIC17.23■□□□□ 0.35
Cntnap3E9PY62 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cntnap3E9PY62 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cntnap3E9PY62 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Gm45384-201ENSMUST00000210451 277 ntBASIC17.21■□□□□ 0.35
Cntnap3E9PY62 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cntnap3E9PY62 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms