Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Gm7488-201ENSMUST00000117148 684 ntBASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Gm14719-201ENSMUST00000121891 340 ntBASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Gm8116-201ENSMUST00000182917 1201 ntBASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Gm27680-201ENSMUST00000184192 160 ntBASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Gm7730-201ENSMUST00000212486 454 ntBASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hfm1D3Z4R1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Gm42934-201ENSMUST00000196920 1345 ntBASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Gm11543-201ENSMUST00000120758 370 ntBASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hfm1D3Z4R1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 AC132863.2-201ENSMUST00000226643 799 ntBASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Hfm1D3Z4R1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 Gm15487-201ENSMUST00000122373 465 ntBASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 Gm38225-201ENSMUST00000194001 393 ntBASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hfm1D3Z4R1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hfm1D3Z4R1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC21.83■■□□□ 1.08
Hfm1D3Z4R1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Hfm1D3Z4R1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Hfm1D3Z4R1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Gm7653-201ENSMUST00000214567 508 ntBASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Gm9063-201ENSMUST00000223299 582 ntBASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hfm1D3Z4R1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Gm8410-201ENSMUST00000117225 605 ntBASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hfm1D3Z4R1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms