Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Gm7787-201ENSMUST00000216858 688 ntBASIC13.22□□□□□ -0.29
Col6a4A2AX52 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.22□□□□□ -0.29
Col6a4A2AX52 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.22□□□□□ -0.29
Col6a4A2AX52 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Gm45612-201ENSMUST00000211320 160 ntBASIC13.22□□□□□ -0.29
Col6a4A2AX52 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.22□□□□□ -0.29
Col6a4A2AX52 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a4A2AX52 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Col6a4A2AX52 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.21□□□□□ -0.29
Col6a4A2AX52 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a4A2AX52 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Col6a4A2AX52 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.21□□□□□ -0.3
Col6a4A2AX52 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a4A2AX52 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.2□□□□□ -0.3
Col6a4A2AX52 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a4A2AX52 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Gm12428-201ENSMUST00000119844 727 ntBASIC13.19□□□□□ -0.3
Col6a4A2AX52 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Rprl2-201ENSMUST00000157150 290 ntBASIC13.19□□□□□ -0.3
Col6a4A2AX52 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
Col6a4A2AX52 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms