Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Gm8655-201ENSMUST00000221159 852 ntBASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Gm8097-201ENSMUST00000117903 829 ntBASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Gm4459-201ENSMUST00000118750 468 ntBASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cfap99A0A140LIX9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cfap99A0A140LIX9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cfap99A0A140LIX9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cfap99A0A140LIX9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cfap99A0A140LIX9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cfap99A0A140LIX9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Gm43575-201ENSMUST00000196420 516 ntBASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cfap99A0A140LIX9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Gm14140-201ENSMUST00000119999 995 ntBASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cfap99A0A140LIX9 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Gm11780-201ENSMUST00000136880 516 ntBASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Gm9172-201ENSMUST00000212092 954 ntBASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap99A0A140LIX9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms