Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav13n-4A0A0G2JG01 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm27459-201ENSMUST00000184860 107 ntBASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav13n-4A0A0G2JG01 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm13186-201ENSMUST00000118031 316 ntBASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm11452-201ENSMUST00000122376 690 ntBASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav13n-4A0A0G2JG01 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav13n-4A0A0G2JG01 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms