Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4-3A0A0B4J1K1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav4-3A0A0B4J1K1 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Gm13186-201ENSMUST00000118031 316 ntBASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4-3A0A0B4J1K1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms