Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm10566-201ENSMUST00000086739 996 ntBASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Mir5122-201ENSMUST00000175004 89 ntBASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm8520-201ENSMUST00000186517 868 ntBASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav13-4-dv7A0A075B6C2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms