Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6d-5A0A075B6B9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm12134-201ENSMUST00000122109 520 ntBASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6d-5A0A075B6B9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm13474-201ENSMUST00000122466 815 ntBASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm21814-202ENSMUST00000203277 873 ntBASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trav6d-5A0A075B6B9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms