Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-5A0A075B6B5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-5A0A075B6B5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Gm12085-201ENSMUST00000119263 940 ntBASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Gm12933-201ENSMUST00000120203 872 ntBASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-5A0A075B6B5 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-5A0A075B6B5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-5A0A075B6B5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-5A0A075B6B5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms