Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm45058-201ENSMUST00000205810 766 ntBASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6n-6A0A075B6B2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm7889-201ENSMUST00000185591 958 ntBASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6n-6A0A075B6B2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6n-6A0A075B6B2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms