Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav17A0A075B655 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav17A0A075B655 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Mir5122-201ENSMUST00000175004 89 ntBASIC12.5□□□□□ -0.41
Trav17A0A075B655 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav17A0A075B655 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.49□□□□□ -0.41
Trav17A0A075B655 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Gm2274-201ENSMUST00000184539 609 ntBASIC12.49□□□□□ -0.41
Trav17A0A075B655 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.49□□□□□ -0.41
Trav17A0A075B655 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav17A0A075B655 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms