Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 CT010444.2-201ENSMUST00000217877 1629 ntBASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 AC163637.1-201ENSMUST00000215491 1894 ntBASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Mir6349-201ENSMUST00000184059 97 ntBASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Wnt10b-205ENSMUST00000226846 1204 ntBASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav3-4A0A075B654 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Gm13509-201ENSMUST00000119733 1308 ntBASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Gm45417-201ENSMUST00000209533 758 ntBASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav3-4A0A075B654 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-4A0A075B654 Gm6139-201ENSMUST00000079261 882 ntBASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms