Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Gm26524-201ENSMUST00000192339 390 ntBASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav8-1A0A075B641 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Gm10138-203ENSMUST00000206952 366 ntBASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav8-1A0A075B641 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav8-1A0A075B641 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms