Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav4-2A0A075B638 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Gm5643-201ENSMUST00000117081 966 ntBASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Gm12134-201ENSMUST00000122109 520 ntBASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-2A0A075B638 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-2A0A075B638 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Trav4-2A0A075B638 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Gm10698-201ENSMUST00000182663 604 ntBASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Gm8495-201ENSMUST00000188740 694 ntBASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Gm10602-201ENSMUST00000098239 609 ntBASIC12.45□□□□□ -0.42
Trav4-2A0A075B638 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms