Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 BC037039-201ENSMUST00000192003 2205 ntBASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav16d-dv11A0A075B617 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav16d-dv11A0A075B617 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav16d-dv11A0A075B617 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm7638-201ENSMUST00000121348 967 ntBASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav16d-dv11A0A075B617 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav16d-dv11A0A075B617 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms