Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav6-1A0A075B5Z8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm13436-201ENSMUST00000120418 567 ntBASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm27011-201ENSMUST00000182352 972 ntBASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm10812-201ENSMUST00000099864 546 ntBASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav6-1A0A075B5Z8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-1A0A075B5Z8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms