Protein–RNA interactions for Protein: T1NXB5

Vstm4, V-set and transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vstm4T1NXB5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vstm4T1NXB5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vstm4T1NXB5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vstm4T1NXB5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Gm10052-201ENSMUST00000168019 960 ntBASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Gm37722-201ENSMUST00000193757 208 ntBASIC17.08■□□□□ 0.32
Vstm4T1NXB5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.08■□□□□ 0.32
Vstm4T1NXB5 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.08■□□□□ 0.32
Vstm4T1NXB5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Gm7729-201ENSMUST00000050143 801 ntBASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vstm4T1NXB5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Mir5130-201ENSMUST00000175160 84 ntBASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Mir6404-201ENSMUST00000183699 94 ntBASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Gm37055-201ENSMUST00000191866 133 ntBASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vstm4T1NXB5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.06■□□□□ 0.32
Vstm4T1NXB5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Gm6257-201ENSMUST00000163864 910 ntBASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Gm45058-201ENSMUST00000205810 766 ntBASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Vstm4T1NXB5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.04■□□□□ 0.32
Vstm4T1NXB5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vstm4T1NXB5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vstm4T1NXB5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.04■□□□□ 0.32
Vstm4T1NXB5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vstm4T1NXB5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Vstm4T1NXB5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vstm4T1NXB5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms