Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.09□□□□□ -0.47
PdfS4R2K0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.09□□□□□ -0.47
PdfS4R2K0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.09□□□□□ -0.47
PdfS4R2K0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
PdfS4R2K0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
PdfS4R2K0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
PdfS4R2K0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
PdfS4R2K0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
PdfS4R2K0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.08□□□□□ -0.48
PdfS4R2K0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Gm17661-201ENSMUST00000170317 270 ntBASIC12.08□□□□□ -0.48
PdfS4R2K0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
PdfS4R2K0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PdfS4R2K0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.07□□□□□ -0.48
PdfS4R2K0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PdfS4R2K0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Gm15565-201ENSMUST00000118890 427 ntBASIC12.07□□□□□ -0.48
PdfS4R2K0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.07□□□□□ -0.48
PdfS4R2K0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.07□□□□□ -0.48
PdfS4R2K0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PdfS4R2K0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms