Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Gm5177-201ENSMUST00000183092 997 ntBASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Gm17968-201ENSMUST00000194902 784 ntBASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Scn8aQ9WTU3 App-207ENSMUST00000227737 2827 ntBASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn8aQ9WTU3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn8aQ9WTU3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Gm12008-201ENSMUST00000117791 755 ntBASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Gm11594-201ENSMUST00000122313 162 ntBASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.73■□□□□ 0.11
Scn8aQ9WTU3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn8aQ9WTU3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms