Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gm12497-201ENSMUST00000138778 237 ntBASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gm8396-201ENSMUST00000057361 823 ntBASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col13a1Q9R1N9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Gm13616-201ENSMUST00000120600 222 ntBASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col13a1Q9R1N9 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col13a1Q9R1N9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms