Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Gm26039-201ENSMUST00000158152 144 ntBASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Mir1668-201ENSMUST00000184114 107 ntBASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lsm4Q9QXA5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Gm8520-201ENSMUST00000186517 868 ntBASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Lsm4Q9QXA5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.43□□□□□ -0.42
Lsm4Q9QXA5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm4Q9QXA5 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms