Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.29□□□□□ -0.12
Prg4Q9JM99 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.29□□□□□ -0.12
Prg4Q9JM99 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.29□□□□□ -0.12
Prg4Q9JM99 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.28□□□□□ -0.12
Prg4Q9JM99 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Gm27628-201ENSMUST00000184911 107 ntBASIC14.28□□□□□ -0.12
Prg4Q9JM99 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Psmb5-202ENSMUST00000227257 622 ntBASIC14.28□□□□□ -0.12
Prg4Q9JM99 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prg4Q9JM99 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.27□□□□□ -0.12
Prg4Q9JM99 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.27□□□□□ -0.12
Prg4Q9JM99 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Prg4Q9JM99 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gm9682-201ENSMUST00000197505 556 ntBASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gm7787-201ENSMUST00000216858 688 ntBASIC14.27□□□□□ -0.13
Prg4Q9JM99 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gm15823-201ENSMUST00000064305 670 ntBASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prg4Q9JM99 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms