Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Gm5874-201ENSMUST00000096101 508 ntBASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Gm7290-201ENSMUST00000104990 617 ntBASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Gm12918-201ENSMUST00000120234 636 ntBASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Gm15710-201ENSMUST00000121821 636 ntBASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Gm5075-201ENSMUST00000196916 622 ntBASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trem1Q9JKE2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Gm6576-201ENSMUST00000169678 883 ntBASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trem1Q9JKE2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trem1Q9JKE2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem1Q9JKE2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms