Protein–RNA interactions for Protein: Q9JJW6

Alyref2, Aly/REF export factor 2, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alyref2Q9JJW6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Alyref2Q9JJW6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Alyref2Q9JJW6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Zfp783-201ENSMUST00000095946 670 ntBASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Alyref2Q9JJW6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Alyref2Q9JJW6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Alyref2Q9JJW6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alyref2Q9JJW6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alyref2Q9JJW6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Alyref2Q9JJW6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.21□□□□□ -0.14
Alyref2Q9JJW6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms