Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tnfrsf13bQ9ET35 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Mir1668-201ENSMUST00000184114 107 ntBASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tnfrsf13bQ9ET35 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfrsf13bQ9ET35 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tnfrsf13bQ9ET35 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm8520-201ENSMUST00000186517 868 ntBASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm5417-201ENSMUST00000079706 384 ntBASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tnfrsf13bQ9ET35 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tnfrsf13bQ9ET35 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms