Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Gm15378-201ENSMUST00000121894 207 ntBASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Gm4974-201ENSMUST00000209974 875 ntBASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Gm29257-201ENSMUST00000186115 639 ntBASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ube4bQ9ES00 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Gm20760-201ENSMUST00000179197 648 ntBASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Gm43183-201ENSMUST00000200632 547 ntBASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ube4bQ9ES00 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ube4bQ9ES00 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.15■□□□□ 0.02
Ube4bQ9ES00 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 121.9 ms