Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lime1Q9EQR5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.68□□□□□ -0.22
Lime1Q9EQR5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lime1Q9EQR5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Gm6433-201ENSMUST00000118634 875 ntBASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Gm15565-201ENSMUST00000118890 427 ntBASIC13.67□□□□□ -0.22
Lime1Q9EQR5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lime1Q9EQR5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Gm25406-201ENSMUST00000157599 105 ntBASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lime1Q9EQR5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms