Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Vps35Q9EQH3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps35Q9EQH3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Vps35Q9EQH3 Prob1-201ENSMUST00000097619 3021 ntBASIC15.77■□□□□ 0.11
Vps35Q9EQH3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps35Q9EQH3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps35Q9EQH3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps35Q9EQH3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Vps35Q9EQH3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.77■□□□□ 0.11
Vps35Q9EQH3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Gm25406-201ENSMUST00000157599 105 ntBASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Gm27867-201ENSMUST00000184778 125 ntBASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps35Q9EQH3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Gm34391-201ENSMUST00000203706 907 ntBASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Birc2-201ENSMUST00000054878 378 ntBASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps35Q9EQH3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Gm12644-201ENSMUST00000119935 606 ntBASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Vps35Q9EQH3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps35Q9EQH3 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms