Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upf1Q9EPU0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upf1Q9EPU0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upf1Q9EPU0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Shd-206ENSMUST00000225145 998 ntBASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Upf1Q9EPU0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Gm24543-201ENSMUST00000103867 82 ntBASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Gm16026-204ENSMUST00000162652 683 ntBASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Upf1Q9EPU0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Gm15483-201ENSMUST00000120338 456 ntBASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Mir6392-201ENSMUST00000184924 108 ntBASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Upf1Q9EPU0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Gm43179-201ENSMUST00000198797 275 ntBASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Upf1Q9EPU0 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Gm8062-201ENSMUST00000139696 444 ntBASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Gm6257-201ENSMUST00000163864 910 ntBASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Gm17420-201ENSMUST00000164753 153 ntBASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.7■□□□□ 0.42
Upf1Q9EPU0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms