Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Gm10602-201ENSMUST00000098239 609 ntBASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hmg20aQ9DC33 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hmg20aQ9DC33 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Gm27275-201ENSMUST00000184318 272 ntBASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hmg20aQ9DC33 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms