Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp5Q9D7S9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Gm37722-201ENSMUST00000193757 208 ntBASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Gm45058-201ENSMUST00000205810 766 ntBASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp5Q9D7S9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.7■□□□□ 0.74
Chmp5Q9D7S9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chmp5Q9D7S9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp5Q9D7S9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp5Q9D7S9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.7■□□□□ 0.74
Chmp5Q9D7S9 Gm44430-201ENSMUST00000203376 995 ntBASIC19.7■□□□□ 0.74
Chmp5Q9D7S9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp5Q9D7S9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp5Q9D7S9 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Gm10052-201ENSMUST00000168019 960 ntBASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Gm7729-201ENSMUST00000050143 801 ntBASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp5Q9D7S9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp5Q9D7S9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Gm7889-201ENSMUST00000185591 958 ntBASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp5Q9D7S9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms