Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RtcAQ9D7H3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.35■□□□□ 0.05
RtcAQ9D7H3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.35■□□□□ 0.05
RtcAQ9D7H3 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Rps4l-201ENSMUST00000071745 943 ntBASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.35■□□□□ 0.05
RtcAQ9D7H3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gm4535-201ENSMUST00000182274 558 ntBASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gm10355-201ENSMUST00000097146 517 ntBASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RtcAQ9D7H3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RtcAQ9D7H3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RtcAQ9D7H3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RtcAQ9D7H3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
RtcAQ9D7H3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RtcAQ9D7H3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RtcAQ9D7H3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RtcAQ9D7H3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms