Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.29■□□□□ 0.2
Nop56Q9D6Z1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.28■□□□□ 0.2
Nop56Q9D6Z1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Gm10653-202ENSMUST00000139570 835 ntBASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.27■□□□□ 0.2
Nop56Q9D6Z1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Nop56Q9D6Z1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Gm715-201ENSMUST00000117865 831 ntBASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Nop56Q9D6Z1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Nop56Q9D6Z1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms