Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Rab3c-203ENSMUST00000224180 967 ntBASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShpkQ9D5J6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Gm18025-201ENSMUST00000221733 862 ntBASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Gm10493-201ENSMUST00000097270 612 ntBASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShpkQ9D5J6 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Gm9731-201ENSMUST00000209480 747 ntBASIC13.18□□□□□ -0.3
ShpkQ9D5J6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.18□□□□□ -0.3
ShpkQ9D5J6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Gm36967-201ENSMUST00000193814 266 ntBASIC13.17□□□□□ -0.3
ShpkQ9D5J6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.17□□□□□ -0.3
ShpkQ9D5J6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ShpkQ9D5J6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ShpkQ9D5J6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms