Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ddx56Q9D0R4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Gm12895-201ENSMUST00000122214 226 ntBASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Gm25745-201ENSMUST00000174945 133 ntBASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ddx56Q9D0R4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Gm7367-201ENSMUST00000057611 492 ntBASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ddx56Q9D0R4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ddx56Q9D0R4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ddx56Q9D0R4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms