Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Gm37466-201ENSMUST00000195692 652 ntBASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Gm4875-201ENSMUST00000118257 786 ntBASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Mir6392-201ENSMUST00000184924 108 ntBASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lysmd1Q9D0E3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lysmd1Q9D0E3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.7■□□□□ 0.26
Lysmd1Q9D0E3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Lysmd1Q9D0E3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms