Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Gm18958-201ENSMUST00000174258 762 ntBASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Gm21362-201ENSMUST00000194272 928 ntBASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Gm19430-201ENSMUST00000193847 2137 ntBASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Mrpl55Q9CZ83 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Idnk-204ENSMUST00000226010 1898 ntBASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Gm14859-201ENSMUST00000117752 357 ntBASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Gm17661-201ENSMUST00000170317 270 ntBASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Mrpl55Q9CZ83 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Gm10605-202ENSMUST00000183019 3198 ntBASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.4□□□□□ -0.74
Mrpl55Q9CZ83 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms