Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Q9CYI0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.36■□□□□ 0.37
Q9CYI0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Q9CYI0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.36■□□□□ 0.37
Q9CYI0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.36■□□□□ 0.37
Q9CYI0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.36■□□□□ 0.37
Q9CYI0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Q9CYI0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Q9CYI0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Q9CYI0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Q9CYI0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Q9CYI0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Gm13036-201ENSMUST00000117799 748 ntBASIC17.35■□□□□ 0.37
Q9CYI0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.35■□□□□ 0.37
Q9CYI0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.35■□□□□ 0.37
Q9CYI0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Q9CYI0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.35■□□□□ 0.37
Q9CYI0 Gm18622-201ENSMUST00000219361 595 ntBASIC17.35■□□□□ 0.37
Q9CYI0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.35■□□□□ 0.37
Q9CYI0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Q9CYI0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Q9CYI0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Q9CYI0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.34■□□□□ 0.37
Q9CYI0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.34■□□□□ 0.37
Q9CYI0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.34■□□□□ 0.37
Q9CYI0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.34■□□□□ 0.37
Q9CYI0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.34■□□□□ 0.37
Q9CYI0 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Q9CYI0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.34■□□□□ 0.37
Q9CYI0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Q9CYI0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.34■□□□□ 0.37
Q9CYI0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CYI0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CYI0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CYI0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CYI0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CYI0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CYI0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CYI0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Q9CYI0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Q9CYI0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.33■□□□□ 0.36
Q9CYI0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.33■□□□□ 0.36
Q9CYI0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.33■□□□□ 0.36
Q9CYI0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Q9CYI0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.33■□□□□ 0.36
Q9CYI0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Q9CYI0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms