Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TpbpbQ9CQC0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TpbpbQ9CQC0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TpbpbQ9CQC0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TpbpbQ9CQC0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Gm12527-201ENSMUST00000117967 564 ntBASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TpbpbQ9CQC0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Gm29707-201ENSMUST00000196325 491 ntBASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TpbpbQ9CQC0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TpbpbQ9CQC0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TpbpbQ9CQC0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms