Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim33Q99PP7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim33Q99PP7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.62■□□□□ 0.09
Trim33Q99PP7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trim33Q99PP7 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.62■□□□□ 0.09
Trim33Q99PP7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim33Q99PP7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.61■□□□□ 0.09
Trim33Q99PP7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Gm28033-201ENSMUST00000184224 96 ntBASIC15.61■□□□□ 0.09
Trim33Q99PP7 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trim33Q99PP7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Gm12895-201ENSMUST00000122214 226 ntBASIC15.6■□□□□ 0.09
Trim33Q99PP7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Gm44454-201ENSMUST00000198541 138 ntBASIC15.6■□□□□ 0.09
Trim33Q99PP7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Trim33Q99PP7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms