Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.9□□□□□ -0.02
Chmp1b1Q99LU0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Gm7284-201ENSMUST00000131667 944 ntBASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chmp1b1Q99LU0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chmp1b1Q99LU0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms