Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.39■□□□□ 0.69
RtcbQ99LF4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Gm24158-201ENSMUST00000175263 71 ntBASIC19.39■□□□□ 0.69
RtcbQ99LF4 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.39■□□□□ 0.69
RtcbQ99LF4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Gm12428-201ENSMUST00000119844 727 ntBASIC19.38■□□□□ 0.69
RtcbQ99LF4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Mir6977-201ENSMUST00000184960 64 ntBASIC19.38■□□□□ 0.69
RtcbQ99LF4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RtcbQ99LF4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC19.37■□□□□ 0.69
RtcbQ99LF4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RtcbQ99LF4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.36■□□□□ 0.69
RtcbQ99LF4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RtcbQ99LF4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.35■□□□□ 0.69
RtcbQ99LF4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.35■□□□□ 0.69
RtcbQ99LF4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Haglr-201ENSMUST00000100000 2085 ntBASIC19.35■□□□□ 0.69
RtcbQ99LF4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RtcbQ99LF4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RtcbQ99LF4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RtcbQ99LF4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.34■□□□□ 0.69
RtcbQ99LF4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.34■□□□□ 0.69
RtcbQ99LF4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms