Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Col20a1Q923P0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.54■□□□□ 0.56
Col20a1Q923P0 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.54■□□□□ 0.56
Col20a1Q923P0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.54■□□□□ 0.56
Col20a1Q923P0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Col20a1Q923P0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Col20a1Q923P0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.53■□□□□ 0.56
Col20a1Q923P0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.53■□□□□ 0.56
Col20a1Q923P0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col20a1Q923P0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.52■□□□□ 0.56
Col20a1Q923P0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Mir3113-201ENSMUST00000175478 76 ntBASIC18.52■□□□□ 0.56
Col20a1Q923P0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.52■□□□□ 0.56
Col20a1Q923P0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.52■□□□□ 0.56
Col20a1Q923P0 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.52■□□□□ 0.56
Col20a1Q923P0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Col20a1Q923P0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col20a1Q923P0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col20a1Q923P0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Col20a1Q923P0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col20a1Q923P0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col20a1Q923P0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Gm2756-201ENSMUST00000195851 400 ntBASIC18.51■□□□□ 0.55
Col20a1Q923P0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Gm10175-201ENSMUST00000086013 645 ntBASIC18.51■□□□□ 0.55
Col20a1Q923P0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col20a1Q923P0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms