Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Gm6623-201ENSMUST00000173570 544 ntBASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Gm5587-201ENSMUST00000206270 674 ntBASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb4Q91XZ6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhb4Q91XZ6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhb4Q91XZ6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Pcdhb4Q91XZ6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhb4Q91XZ6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms