Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Gm4459-201ENSMUST00000118750 468 ntBASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Gm7367-201ENSMUST00000057611 492 ntBASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb6Q91XZ4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Asic1-205ENSMUST00000228185 1818 ntBASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb6Q91XZ4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Gm18622-201ENSMUST00000219361 595 ntBASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb6Q91XZ4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb6Q91XZ4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Gm21362-201ENSMUST00000194272 928 ntBASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb6Q91XZ4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms