Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb8Q91XZ2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb8Q91XZ2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb8Q91XZ2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb8Q91XZ2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb8Q91XZ2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Gm27742-201ENSMUST00000184667 60 ntBASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb8Q91XZ2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Olfr129-201ENSMUST00000122318 993 ntBASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Gm6257-201ENSMUST00000163864 910 ntBASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb8Q91XZ2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb8Q91XZ2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb8Q91XZ2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms