Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhgb4Q91XX6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhgb4Q91XX6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Gm27742-201ENSMUST00000184667 60 ntBASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Gm42660-201ENSMUST00000197733 947 ntBASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhgb4Q91XX6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Gm38116-201ENSMUST00000193873 1533 ntBASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms