Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhgc5Q91XW9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
Pcdhgc5Q91XW9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhgc5Q91XW9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Gm10175-201ENSMUST00000086013 645 ntBASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhgc5Q91XW9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Gm12497-201ENSMUST00000138778 237 ntBASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhgc5Q91XW9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhgc5Q91XW9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Auts2-212ENSMUST00000178555 309 ntBASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc5Q91XW9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhgc5Q91XW9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhgc5Q91XW9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms